CDS

Accession Number TCMCG057C49599
gbkey CDS
Protein Id XP_018452129.1
Location complement(join(22177666..22177803,22177876..22178013,22178096..22178173,22178253..22178329,22178414..22178522,22178617..22178682,22178762..22178908,22179002..22179079))
Gene LOC108823429
GeneID 108823429
Organism Raphanus sativus

Protein

Length 276aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018596627.1
Definition PREDICTED: tryptophan synthase alpha chain [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category E
Description Belongs to the TrpA family
KEGG_TC -
KEGG_Module M00023        [VIEW IN KEGG]
KEGG_Reaction R00674        [VIEW IN KEGG]
R02340        [VIEW IN KEGG]
R02722        [VIEW IN KEGG]
KEGG_rclass RC00209        [VIEW IN KEGG]
RC00210        [VIEW IN KEGG]
RC00700        [VIEW IN KEGG]
RC00701        [VIEW IN KEGG]
RC02868        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01695        [VIEW IN KEGG]
ko:K13222        [VIEW IN KEGG]
EC 4.1.2.8        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.1.20        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00260        [VIEW IN KEGG]
ko00400        [VIEW IN KEGG]
ko00402        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00260        [VIEW IN KEGG]
map00400        [VIEW IN KEGG]
map00402        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0000162        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004834        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006568        [VIEW IN EMBL-EBI]
GO:0006576        [VIEW IN EMBL-EBI]
GO:0006586        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008652        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009072        [VIEW IN EMBL-EBI]
GO:0009073        [VIEW IN EMBL-EBI]
GO:0009308        [VIEW IN EMBL-EBI]
GO:0009309        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016830        [VIEW IN EMBL-EBI]
GO:0016832        [VIEW IN EMBL-EBI]
GO:0016835        [VIEW IN EMBL-EBI]
GO:0016836        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0033984        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042401        [VIEW IN EMBL-EBI]
GO:0042430        [VIEW IN EMBL-EBI]
GO:0042435        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044106        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046219        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901605        [VIEW IN EMBL-EBI]
GO:1901607        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCTTCCCAACAACCCTCCCACAACAACAGTGGGTCTATCAGAGACTTTCGCTAGGTTAAAGTCACAACGCAAAGTGGCTCTGATTCCATATATCACAGCTGGTGATCCAGATCTTTCCACAACAGCTAAAGCTCTCAAAGTGCTCGGCTCCTGTGGCTCCGACATTATCGAACTCGGTGTTCCTTACTCTGACCCTTTAGCCGATGGTCCAGCAATCCAGGCTGCTGCGAGACGTTCTTTGCTTAAAGGAACCAACTTTAACTCCATTATCTCCATGCTTAAAGAGGTTATTCCTCAGTTATCTTGTCCTATTGCACTGTTTACGTATTACAACCCTATTCTAAGGCGAGGGATCGAGAACTACATGACGATCATCAAGGATGCTGGAGTTCATGGGCTTCTTGTCCCTGATGTTCCACTCGAAGAGACTGAGACTCTGCGGAAGGAAGCTCAAAAGCATCAGATTGAACTTGTACTACTCACAACACCCACAACCCCGAAAGAACGAATGAATGCCATTGTTGAAGCATCCCAAGGATTCATCTATCTTGTAAGTTCAGTAGGAGTAACTGGTACGAGAGAGTCTGTTAACGAACACGTTCAGTCTCTTCTACAACAGATCAAAGAGGCTACAAGCAAGCCAGTCGCTGTTGGATTTGGCATATCCAAACCTGAGCATGTGAAACAGGTAGCTGAGTGGGGAGCTGATGGAGTCATTGTAGGAAGCGCAATGGTAAAGATATTGGGAGAGGCTGAGTCACCTGAGCAAGGACTTAAGGAGCTTGAAGTCTTCACTAAGTCTTTAAAGTCTGCTCTTGACTCTTGA
Protein:  
MDLPNNPPTTTVGLSETFARLKSQRKVALIPYITAGDPDLSTTAKALKVLGSCGSDIIELGVPYSDPLADGPAIQAAARRSLLKGTNFNSIISMLKEVIPQLSCPIALFTYYNPILRRGIENYMTIIKDAGVHGLLVPDVPLEETETLRKEAQKHQIELVLLTTPTTPKERMNAIVEASQGFIYLVSSVGVTGTRESVNEHVQSLLQQIKEATSKPVAVGFGISKPEHVKQVAEWGADGVIVGSAMVKILGEAESPEQGLKELEVFTKSLKSALDS